6XV5 image
Deposition Date 2020-01-21
Release Date 2021-02-03
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6XV5
Keywords:
MEMBRANE PROTEIN
Title:
Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with ertapenem
Biological Source:
Source Organism:
Yersinia pestis (Taxon ID: 632)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.67 Å
R-Value Free:
0.28
R-Value Work:
0.21
Space Group:
P 21 21 21
6XV5 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Peptidoglycan D,D-transpeptidase MrdA
Chain IDs:A (auth: BBB), B (auth: AAA)
Chain Length:583
Number of Molecules:2
Biological Source:Yersinia pestis
UniProt ID:A0A0H2W2Y2 Pfam ID:PF03717, PF00905
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
O2E A SER modified residue
Ligand Molecules
TLA
Primary Citation
The structure of penicillin-binding protein 2 from Yersinia pestis
To Be Published ? ? ? (?)
Primary Citation of related structures
6TII
6TIX