6XTZ image
Entry Detail
PDB ID:
6XTZ
Title:
Structure of Dally-like protein in complex with O-palmitoleoyl serine
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-01-16
Release Date:
2020-07-29
Method Details:
Experimental Method:
Resolution:
2.21 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dally-like, isoform A
Mutations:K398Q, K399A, R402Q, R438Q, R441A
Chain IDs:A
Chain Length:555
Number of Molecules:1
Biological Source:Drosophila melanogaster
Primary Citation
Glypicans shield the Wnt lipid moiety to enable signalling at a distance.
Nature 585 85 90 (2020)
PMID: 32699409 DOI: 10.1038/s41586-020-2498-z

Abstact

A relatively small number of proteins have been suggested to act as morphogens-signalling molecules that spread within tissues to organize tissue repair and the specification of cell fate during development. Among them are Wnt proteins, which carry a palmitoleate moiety that is essential for signalling activity1-3. How a hydrophobic lipoprotein can spread in the aqueous extracellular space is unknown. Several mechanisms, such as those involving lipoprotein particles, exosomes or a specific chaperone, have been proposed to overcome this so-called Wnt solubility problem4-6. Here we provide evidence against these models and show that the Wnt lipid is shielded by the core domain of a subclass of glypicans defined by the Dally-like protein (Dlp). Structural analysis shows that, in the presence of palmitoleoylated peptides, these glypicans change conformation to create a hydrophobic space. Thus, glypicans of the Dlp family protect the lipid of Wnt proteins from the aqueous environment and serve as a reservoir from which Wnt proteins can be handed over to signalling receptors.

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