6XR4 image
Entry Detail
PDB ID:
6XR4
EMDB ID:
Title:
Integrative in situ structure of Parkinsons disease-linked human LRRK2
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-07-10
Release Date:
2020-08-19
Method Details:
Experimental Method:
Resolution:
14.00 Å
Aggregation State:
CELL
Reconstruction Method:
SUBTOMOGRAM AVERAGING
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Leucine-rich repeat serine/threonine-protein kinase 2
Mutations:I2020T
Chain IDs:A, B
Chain Length:2527
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The In Situ Structure of Parkinson's Disease-Linked LRRK2.
Cell 182 1508 ? (2020)
PMID: 32783917 DOI: 10.1016/j.cell.2020.08.004

Abstact

Mutations in leucine-rich repeat kinase 2 (LRRK2) are the most frequent cause of familial Parkinson's disease. LRRK2 is a multi-domain protein containing a kinase and GTPase. Using correlative light and electron microscopy, in situ cryo-electron tomography, and subtomogram analysis, we reveal a 14-Å structure of LRRK2 bearing a pathogenic mutation that oligomerizes as a right-handed double helix around microtubules, which are left-handed. Using integrative modeling, we determine the architecture of LRRK2, showing that the GTPase and kinase are in close proximity, with the GTPase closer to the microtubule surface, whereas the kinase is exposed to the cytoplasm. We identify two oligomerization interfaces mediated by non-catalytic domains. Mutation of one of these abolishes LRRK2 microtubule-association. Our work demonstrates the power of cryo-electron tomography to generate models of previously unsolved structures in their cellular environment.

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Primary Citation of related structures