6XQB image
Deposition Date 2020-07-09
Release Date 2020-07-29
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6XQB
Keywords:
VIRAL PROTEIN, TRANSFERASE/HYDROLASE
Title:
SARS-CoV-2 RdRp/RNA complex
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
6XQB validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RNA-directed RNA polymerase
Gene (Uniprot):rep
Chain IDs:A
Chain Length:941
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTD1 Pfam ID:PF06478, PF00680, PF08717, PF08716 EC:2.7.7.48
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural protein 8
Gene (Uniprot):rep
Chain IDs:B, D
Chain Length:207
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTD1 Pfam ID:PF06478, PF00680, PF08717, PF08716 EC:2.7.7.48
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural protein 7
Gene (Uniprot):rep
Chain IDs:C
Chain Length:92
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTD1 Pfam ID:PF06478, PF00680, PF08717, PF08716 EC:2.7.7.48
Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3')
Chain IDs:E, F
Chain Length:9
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
Ligand Molecules
MG
ZN
Primary Citation
Structure of SARS-CoV-2 RdRp/RNA complex at 3.4 Angstroms resolution
To Be Published ? ? ? (?)
Primary Citation of related structures
6XQB