6XP8 image
Entry Detail
PDB ID:
6XP8
Title:
The crystal structure of TfuA involved in peptide backbone thioamidation from Methanosarcina acetivorans
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2020-07-08
Release Date:
2021-03-17
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:TfuA domain-containing protein
Chain IDs:A
Chain Length:217
Number of Molecules:1
Biological Source:Methanosarcina acetivorans
Primary Citation
Functional elucidation of TfuA in peptide backbone thioamidation.
Nat.Chem.Biol. 17 585 592 (2021)
PMID: 33707784 DOI: 10.1038/s41589-021-00771-0

Abstact

YcaO enzymes catalyze several post-translational modifications on peptide substrates, including thioamidation, which substitutes an amide oxygen with sulfur. Most predicted thioamide-forming YcaO enzymes are encoded adjacent to TfuA, which when present, is required for thioamidation. While activation of the peptide amide backbone is well established for YcaO enzymes, the function of TfuA has remained enigmatic. Here we characterize the TfuA protein involved in methyl-coenzyme M reductase thioamidation and demonstrate that TfuA catalyzes the hydrolysis of thiocarboxylated ThiS (ThiS-COSH), a proteinaceous sulfur donor, and enhances the affinity of YcaO toward the thioamidation substrate. We also report a crystal structure of a TfuA, which displays a new protein fold. Our structural and mutational analyses of TfuA have uncovered conserved binding interfaces with YcaO and ThiS in addition to revealing a hydrolase-like active site featuring a Ser-Lys catalytic pair.

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