6XL2 image
Entry Detail
PDB ID:
6XL2
Title:
Structure of the arsenate-bound form of ArrX from Chrysiogenes arsenatis
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-06-27
Release Date:
2021-02-17
Method Details:
Experimental Method:
Resolution:
1.74 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ArrX
Chain IDs:A
Chain Length:305
Number of Molecules:1
Biological Source:Chrysiogenes arsenatis
Ligand Molecules
Primary Citation
Structural and Functional Investigation of the Periplasmic Arsenate-Binding Protein ArrX from Chrysiogenes arsenatis .
Biochemistry 60 465 476 (2021)
PMID: 33538578 DOI: 10.1021/acs.biochem.0c00555

Abstact

The anaerobic bacterium Chrysiogenes arsenatis respires using the oxyanion arsenate (AsO43-) as the terminal electron acceptor, where it is reduced to arsenite (AsO33-) while concomitantly oxidizing various organic (e.g., acetate) electron donors. This respiratory activity is catalyzed in the periplasm of the bacterium by the enzyme arsenate reductase (Arr), with expression of the enzyme controlled by a sensor histidine kinase (ArrS) and a periplasmic-binding protein (PBP), ArrX. Here, we report for the first time, the molecular structure of ArrX in the absence and presence of bound ligand arsenate. Comparison of the ligand-bound structure of ArrX with other PBPs shows a high level of conservation of critical residues for ligand binding by these proteins; however, this suite of PBPs shows different structural alterations upon ligand binding. For ArrX and its homologue AioX (from Rhizobium sp. str. NT-26), which specifically binds arsenite, the structures of the substrate-binding sites in the vicinity of a conserved and critical cysteine residue contribute to the discrimination of binding for these chemically similar ligands.

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