6XFQ image
Deposition Date 2020-06-16
Release Date 2021-06-23
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6XFQ
Keywords:
STRUCTURAL PROTEIN
Title:
Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Deinagkistrodon acutus (Taxon ID: 36307)
Host Organism:
Cricetulus griseus
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
3.30 Å
R-Value Free:
0.31
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 41 21 2
6XFQ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Snaclec agglucetin subunit alpha-1
Chain IDs:B (auth: A)
Chain Length:154
Number of Molecules:1
Biological Source:Deinagkistrodon acutus
UniProt ID:Q8JIV9 Pfam ID:PF00059
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Snaclec agglucetin subunit beta-2
Chain IDs:C (auth: B)
Chain Length:149
Number of Molecules:1
Biological Source:Deinagkistrodon acutus
UniProt ID:Q8AYA3 Pfam ID:PF00059
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Platelet glycoprotein Ib alpha chain
Gene (Uniprot):GP1BA
Chain IDs:A (auth: G)
Chain Length:305
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P07359 Pfam ID:PF01462, PF13855
Primary Citation
Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
To be published ? ? ? (?)
Primary Citation of related structures
6XFQ