ISDA: 6X5P

Deposition Date 2020-05-26

Release Date 2020-06-24

Last Version Date 2024-11-20

Entry Detail

PDB ID:

6X5P

Keywords:

BLOOD CLOTTING

Title:

Discovery of Hydroxy Pyrimidine Factor IXa Inhibitors

Biological Source:

Source Organism(s):

Homo sapiens (Taxon ID: 9606)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.23

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 43 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Coagulation factor IX
Gene (Uniprot):F9
Mutagens:A138R
Chain IDs:A
Chain Length:235
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P00740 Pfam ID:PF00089, PF14670 EC:3.4.21.22

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Coagulation factor IX
Gene (Uniprot):F9
Chain IDs:B
Chain Length:62
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P00740 Pfam ID:PF00089, PF14670 EC:3.4.21.22

Ligand Molecules

CIT

GOL

UQD

Primary Citation

Discovery of hydroxy pyrimidine Factor IXa inhibitors.

Jayne, C.L, Andreani, T, Chan, T.Y, Chelliah, M.V, Clasby, M.C, Dwyer, M, Eagen, K.A, Fried, S, Greenlee, W.J, Guo, Z, Hawes, B, Hruza, A, Ingram, R, Keertikar, K.M, Neelamkavil, S, Reichert, P, Xia, Y, Chackalamannil, S.Show

Bioorg.Med.Chem.Lett. 30 127279 127279 (2020)

PMID: 32527459 DOI: 10.1016/j.bmcl.2020.127279

Abstact

The synthesis and structure activity relationship development of a pyrimidine series of heterocyclic Factor IXa inhibitors is described. Increased selectivity over Factor Xa inhibition was achieved through SAR expansion of the P1 element. Select compounds were evaluated in vivo to assess their plasma levels in rat.

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Primary Citation of related structures

Abstact

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