6WZN image
Entry Detail
PDB ID:
6WZN
Title:
Crystal Structure of a Fluorescent Single Chain Fv Chimera
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-05-14
Release Date:
2021-01-27
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fluorescent Single Chain Fv Chimera
Chain IDs:A
Chain Length:465
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Construction, characterization and crystal structure of a fluorescent single-chain Fv chimera.
Protein Eng.Des.Sel. 34 ? ? (2021)
PMID: 33586761 DOI: 10.1093/protein/gzaa029

Abstact

In vitro display technologies based on phage and yeast have a successful history of selecting single-chain variable fragment (scFv) antibodies against various targets. However, single-chain antibodies are often unstable and poorly expressed in Escherichia coli. Here, we explore the feasibility of converting scFv antibodies to an intrinsically fluorescent format by inserting the monomeric, stable fluorescent protein named thermal green, between the light- and heavy-chain variable regions. Our results show that the scTGP format maintains the affinity and specificity of the antibodies, improves expression levels, allows one-step fluorescent assay for detection of binding and is a suitable reagent for epitope binning. We also report the crystal structure of an scTGP construct that recognizes phosphorylated tyrosine on FcεR1 receptor of the allergy pathway.

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