6WTW image
Entry Detail
PDB ID:
6WTW
Title:
Structure of LaINDY crystallized in the presence of alpha-ketoglutarate and malate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-05-04
Release Date:
2020-09-16
Method Details:
Experimental Method:
Resolution:
2.86 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DASS family sodium-coupled anion symporter
Chain IDs:A, B
Chain Length:491
Number of Molecules:2
Biological Source:Lactobacillus acidophilus
Ligand Molecules
Primary Citation
Structural basis for the reaction cycle of DASS dicarboxylate transporters.
Elife 9 ? ? (2020)
PMID: 32869741 DOI: 10.7554/eLife.61350

Abstact

Citrate, α-ketoglutarate and succinate are TCA cycle intermediates that also play essential roles in metabolic signaling and cellular regulation. These di- and tricarboxylates are imported into the cell by the divalent anion sodium symporter (DASS) family of plasma membrane transporters, which contains both cotransporters and exchangers. While DASS proteins transport substrates via an elevator mechanism, to date structures are only available for a single DASS cotransporter protein in a substrate-bound, inward-facing state. We report multiple cryo-EM and X-ray structures in four different states, including three hitherto unseen states, along with molecular dynamics simulations, of both a cotransporter and an exchanger. Comparison of these outward- and inward-facing structures reveal how the transport domain translates and rotates within the framework of the scaffold domain through the transport cycle. Additionally, we propose that DASS transporters ensure substrate coupling by a charge-compensation mechanism, and by structural changes upon substrate release.

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