6WQ1 image
Deposition Date 2020-04-28
Release Date 2021-05-05
Last Version Date 2023-10-18
Entry Detail
PDB ID:
6WQ1
Title:
Eukaryotic LanCL2 protein
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LanC-like protein 2
Gene (Uniprot):LANCL2
Chain IDs:A, B, C, D
Chain Length:450
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome.
Cell 184 2680 2695.e26 (2021)
PMID: 33932340 DOI: 10.1016/j.cell.2021.04.001

Abstact

Enzyme-mediated damage repair or mitigation, while common for nucleic acids, is rare for proteins. Examples of protein damage are elimination of phosphorylated Ser/Thr to dehydroalanine/dehydrobutyrine (Dha/Dhb) in pathogenesis and aging. Bacterial LanC enzymes use Dha/Dhb to form carbon-sulfur linkages in antimicrobial peptides, but the functions of eukaryotic LanC-like (LanCL) counterparts are unknown. We show that LanCLs catalyze the addition of glutathione to Dha/Dhb in proteins, driving irreversible C-glutathionylation. Chemo-enzymatic methods were developed to site-selectively incorporate Dha/Dhb at phospho-regulated sites in kinases. In human MAPK-MEK1, such "elimination damage" generated aberrantly activated kinases, which were deactivated by LanCL-mediated C-glutathionylation. Surveys of endogenous proteins bearing damage from elimination (the eliminylome) also suggest it is a source of electrophilic reactivity. LanCLs thus remove these reactive electrophiles and their potentially dysregulatory effects from the proteome. As knockout of LanCL in mice can result in premature death, repair of this kind of protein damage appears important physiologically.

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Primary Citation of related structures