6WK3 image
Deposition Date 2020-04-15
Release Date 2020-07-08
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6WK3
Title:
Engineered carbene transferase RmaNOD Q52V, putative nitric oxide dioxygenase from Rhodothermus marinus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nitric oxide dioxygenase
Gene (Uniprot):Rmar_2776
Mutations:Q52V
Chain IDs:A, B, C, D
Chain Length:146
Number of Molecules:4
Biological Source:Rhodothermus marinus DSM 4252
Primary Citation
Diversity-Oriented Enzymatic Synthesis of Cyclopropane Building Blocks.
Acs Catalysis 10 7112 7116 (2020)
PMID: 33282460 DOI: 10.1021/acscatal.0c01888

Abstact

While biocatalysis is increasingly incorporated into drug development pipelines, it is less commonly used in the early stages of drug discovery. By engineering a protein to produce a chiral motif with a derivatizable functional handle, biocatalysts can be used to help generate diverse building blocks for drug discovery. Here we show the engineering of two variants of Rhodothermus marinus nitric oxide dioxygenase (RmaNOD) to catalyze the formation of cis- and tran- diastereomers of a pinacolboronate-substituted cyclopropane which can be readily derivatized to generate diverse stereopure cyclopropane building blocks.

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Primary Citation of related structures