6WIK image
Deposition Date 2020-04-10
Release Date 2020-11-11
Last Version Date 2025-05-14
Entry Detail
PDB ID:
6WIK
Title:
Cryo-EM structure of SLC40/ferroportin with Fab in the presence of hepcidin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Solute carrier family 40 protein
Gene (Uniprot):SLC40A1
Chain IDs:C (auth: A)
Chain Length:577
Number of Molecules:1
Biological Source:Carlito syrichta
Polymer Type:polypeptide(L)
Molecule:11F9 Fab light-chain
Chain IDs:A (auth: C)
Chain Length:213
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:11F9 Fab heavy-chain
Chain IDs:B (auth: D)
Chain Length:238
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural basis of ion transport and inhibition in ferroportin.
Nat Commun 11 5686 5686 (2020)
PMID: 33173040 DOI: 10.1038/s41467-020-19458-6

Abstact

Ferroportin is an iron exporter essential for releasing cellular iron into circulation. Ferroportin is inhibited by a peptide hormone, hepcidin. In humans, mutations in ferroportin lead to ferroportin diseases that are often associated with accumulation of iron in macrophages and symptoms of iron deficiency anemia. Here we present the structures of the ferroportin from the primate Philippine tarsier (TsFpn) in the presence and absence of hepcidin solved by cryo-electron microscopy. TsFpn is composed of two domains resembling a clamshell and the structure defines two metal ion binding sites, one in each domain. Both structures are in an outward-facing conformation, and hepcidin binds between the two domains and reaches one of the ion binding sites. Functional studies show that TsFpn is an electroneutral H+/Fe2+ antiporter so that transport of each Fe2+ is coupled to transport of two H+ in the opposite direction. Perturbing either of the ion binding sites compromises the coupled transport of H+ and Fe2+. These results establish the structural basis of metal ion binding, transport and inhibition in ferroportin and provide a blueprint for targeting ferroportin in pharmacological intervention of ferroportin diseases.

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Protein

Chemical

Disease

Primary Citation of related structures
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