6WCJ image
Deposition Date 2020-03-30
Release Date 2020-08-19
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6WCJ
Keywords:
Title:
Asymmetric vertex of the clathrin minicoat cage
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
6.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Clathrin heavy chain 1
Gene (Uniprot):CLTC
Chain IDs:A, C, E (auth: D), H (auth: L), I (auth: M), K (auth: G), L (auth: H), N (auth: I), O (auth: K)
Chain Length:1675
Number of Molecules:9
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Clathrin light chain B
Gene (Uniprot):CLTB
Chain IDs:B, D (auth: E), F, G (auth: O), J, M (auth: N)
Chain Length:228
Number of Molecules:6
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
The structures of natively assembled clathrin-coated vesicles.
Sci Adv 6 eaba8397 eaba8397 (2020)
PMID: 32743076 DOI: 10.1126/sciadv.aba8397

Abstact

Clathrin-coated vesicles mediate trafficking of proteins and nutrients in the cell and between organelles. Proteins included in the clathrin-coated vesicles (CCVs) category include clathrin heavy chain (CHC), clathrin light chain (CLC), and a variety of adaptor protein complexes. Much is known about the structures of the individual CCV components, but data are lacking about the structures of the fully assembled complexes together with membrane and in complex with cargo. Here, we determined the structures of natively assembled CCVs in a variety of geometries. We show that the adaptor β2 appendages crosslink adjacent CHC β-propellers and that the appendage densities are enriched in CCV hexagonal faces. We resolve how adaptor protein 2 and other associated factors in hexagonal faces form an assembly hub with an extensive web of interactions between neighboring β-propellers and propose a structural model that explains how adaptor binding can direct the formation of pentagonal and hexagonal faces.

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Primary Citation of related structures