6WC2 image
Entry Detail
PDB ID:
6WC2
Keywords:
Title:
Crystal Structure of a Ternary MEF2 Chimera/NKX2-5/myocardin enhancer DNA Complex
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2020-03-29
Release Date:
2020-07-22
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:MEF2 Chimera,Myocyte-specific enhancer factor 2B,Myocyte-specific enhancer factor 2A
Chain IDs:A, B, C, D, I, J
Chain Length:95
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Description:Myocardin Enhancer DNA
Chain IDs:E, G, K
Chain Length:21
Number of Molecules:3
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Description:Myocardin Enhancer DNA
Chain IDs:F, H, L
Chain Length:21
Number of Molecules:3
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Description:Homeobox protein Nkx-2.5
Chain IDs:M, N, O
Chain Length:61
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Crystal Structures of Ternary Complexes of MEF2 and NKX2-5 Bound to DNA Reveal a Disease Related Protein-Protein Interaction Interface.
J.Mol.Biol. 432 5499 5508 (2020)
PMID: 32681840 DOI: 10.1016/j.jmb.2020.07.004

Abstact

MEF2 and NKX2-5 transcription factors interact with each other in cardiogenesis and are necessary for normal heart formation. Despite evidence suggesting that these two transcription factors function synergistically and possibly through direct physical interactions, molecular mechanisms by which they interact are not clear. Here we determined the crystal structures of ternary complexes of MEF2 and NKX2-5 bound to myocardin enhancer DNA in two crystal forms. These crystal structures are the first example of human MADS-box/homeobox ternary complex structures involved in cardiogenesis. Our structures reveal two possible modes of interactions between MEF2 and NKX2-5: MEF2 and NKX bind to adjacent DNA sites to recognize DNA in cis; and MEF2 and NKX bind to different DNA strands to interact with each other in trans via a conserved protein-protein interface observed in both crystal forms. Disease-related mutations are mapped to the observed protein-protein interface. Our structural studies provide a starting point to understand and further study the molecular mechanisms of the interactions between MEF2 and NKX2.5 and their roles in cardiogenesis.

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Protein

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Disease

Primary Citation of related structures