6W32 image
Entry Detail
PDB ID:
6W32
Title:
Crystal structure of Sfh5
Biological Source:
PDB Version:
Deposition Date:
2020-03-08
Release Date:
2020-11-25
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.30
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Phosphatidylinositol transfer protein SFH5
Chain IDs:A (auth: B), B (auth: A), C
Chain Length:304
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae (strain YJM789)
Ligand Molecules
Primary Citation
A Sec14-like phosphatidylinositol transfer protein paralog defines a novel class of heme-binding proteins.
Elife 9 ? ? (2020)
PMID: 32780017 DOI: 10.7554/eLife.57081

Abstact

Yeast Sfh5 is an unusual member of the Sec14-like phosphatidylinositol transfer protein (PITP) family. Whereas PITPs are defined by their abilities to transfer phosphatidylinositol between membranes in vitro, and to stimulate phosphoinositide signaling in vivo, Sfh5 does not exhibit these activities. Rather, Sfh5 is a redox-active penta-coordinate high spin FeIII hemoprotein with an unusual heme-binding arrangement that involves a co-axial tyrosine/histidine coordination strategy and a complex electronic structure connecting the open shell iron d-orbitals with three aromatic ring systems. That Sfh5 is not a PITP is supported by demonstrations that heme is not a readily exchangeable ligand, and that phosphatidylinositol-exchange activity is resuscitated in heme binding-deficient Sfh5 mutants. The collective data identify Sfh5 as the prototype of a new class of fungal hemoproteins, and emphasize the versatility of the Sec14-fold as scaffold for translating the binding of chemically distinct ligands to the control of diverse sets of cellular activities.

Legend

Protein

Chemical

Disease

Primary Citation of related structures