6W01 image
Deposition Date 2020-02-28
Release Date 2020-03-11
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6W01
Keywords:
Title:
The 1.9 A Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with a Citrate
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Uridylate-specific endoribonuclease
Gene (Uniprot):rep
Chain IDs:A, B
Chain Length:370
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
Primary Citation
Crystal structure of Nsp15 endoribonuclease NendoU from SARS-CoV-2.
Protein Sci. 29 1596 1605 (2020)
PMID: 32304108 DOI: 10.1002/pro.3873

Abstact

Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) is rapidly spreading around the world. There is no existing vaccine or proven drug to prevent infections and stop virus proliferation. Although this virus is similar to human and animal SARS-CoVs and Middle East Respiratory Syndrome coronavirus (MERS-CoVs), the detailed information about SARS-CoV-2 proteins structures and functions is urgently needed to rapidly develop effective vaccines, antibodies, and antivirals. We applied high-throughput protein production and structure determination pipeline at the Center for Structural Genomics of Infectious Diseases to produce SARS-CoV-2 proteins and structures. Here we report two high-resolution crystal structures of endoribonuclease Nsp15/NendoU. We compare these structures with previously reported homologs from SARS and MERS coronaviruses.

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