6VXZ image
Deposition Date 2020-02-25
Release Date 2020-11-11
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6VXZ
Title:
SthK P300A cyclic nucleotide-gated potassium channel in the closed state, in complex with cAMP
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.42 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SthK
Gene (Uniprot):Spith_0644
Mutations:P300A
Chain IDs:A, B, C, D
Chain Length:456
Number of Molecules:4
Biological Source:Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)
Primary Citation
Prolyl isomerization controls activation kinetics of a cyclic nucleotide-gated ion channel.
Nat Commun 11 6401 6401 (2020)
PMID: 33328472 DOI: 10.1038/s41467-020-20104-4

Abstact

SthK, a cyclic nucleotide-modulated ion channel from Spirochaeta thermophila, activates slowly upon cAMP increase. This is reminiscent of the slow, cAMP-induced activation reported for the hyperpolarization-activated and cyclic nucleotide-gated channel HCN2 in the family of so-called pacemaker channels. Here, we investigate slow cAMP-induced activation in purified SthK channels using stopped-flow assays, mutagenesis, enzymatic catalysis and inhibition assays revealing that the cis/trans conformation of a conserved proline in the cyclic nucleotide-binding domain determines the activation kinetics of SthK. We propose that SthK exists in two forms: trans Pro300 SthK with high ligand binding affinity and fast activation, and cis Pro300 SthK with low affinity and slow activation. Following channel activation, the cis/trans equilibrium, catalyzed by prolyl isomerases, is shifted towards trans, while steady-state channel activity is unaffected. Our results reveal prolyl isomerization as a regulatory mechanism for SthK, and potentially eukaryotic HCN channels. This mechanism could contribute to electrical rhythmicity in cells.

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Primary Citation of related structures