6VX4 image
Deposition Date 2020-02-21
Release Date 2021-02-24
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6VX4
Keywords:
Title:
Density-fitted Model Structure of Antibody Variable Domains of TyTx11 in Complex with Typhoid Toxin
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.12 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Pertussis like toxin subunit B
Chain IDs:B (auth: C), D (auth: A), E (auth: B), F (auth: D), G (auth: E)
Chain Length:114
Number of Molecules:5
Biological Source:Salmonella enterica subsp. enterica serovar Typhi str. CT18
Polymer Type:polypeptide(L)
Molecule:Cytolethal distending toxin subunit B
Chain IDs:I (auth: F)
Chain Length:255
Number of Molecules:1
Biological Source:Salmonella enterica subsp. enterica serovar Typhi str. CT18
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin-like subunit ArtA
Chain IDs:H (auth: G)
Chain Length:224
Number of Molecules:1
Biological Source:Salmonella enterica subsp. enterica serovar Typhi str. CT18
Polymer Type:polypeptide(L)
Molecule:Variable Domain of Heavy Chain of Antibody TyTx11
Chain IDs:C (auth: H)
Chain Length:181
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Variable Domain of Kappa Chain of TyTx11 Antibody
Chain IDs:A (auth: K)
Chain Length:106
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Mechanisms of typhoid toxin neutralization by antibodies targeting glycan receptor binding and nuclease subunits.
Iscience 24 102454 102454 (2021)
PMID: 34113815 DOI: 10.1016/j.isci.2021.102454

Abstact

Nearly all clinical isolates of Salmonella Typhi, the cause of typhoid fever, are antibiotic resistant. All S. Typhi isolates secrete an A2B5 exotoxin called typhoid toxin to benefit the pathogen during infection. Here, we demonstrate that antibiotic-resistant S. Typhi secretes typhoid toxin continuously during infection regardless of antibiotic treatment. We characterize typhoid toxin antibodies targeting glycan-receptor-binding PltB or nuclease CdtB, which neutralize typhoid toxin in vitro and in vivo, as demonstrated by using typhoid toxin secreted by antibiotic-resistant S. Typhi during human cell infection and lethal dose typhoid toxin challenge to mice. TyTx11 generated in this study neutralizes typhoid toxin effectively, comparable to TyTx4 that binds to all PltB subunits available per holotoxin. Cryoelectron microscopy explains that the binding of TyTx11 to CdtB makes this subunit inactive through CdtB catalytic-site conformational change. The identified toxin-neutralizing epitopes are conserved across all S. Typhi clinical isolates, offering critical insights into typhoid toxin-neutralizing strategies.

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Primary Citation of related structures