6VRQ image
Deposition Date 2020-02-08
Release Date 2021-02-17
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6VRQ
Keywords:
Title:
Crystal structure of gl12A21 Fab in complex with anti-idiotypic iv12 Fab
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.57 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:gl12A21 Fab Heavy Chain
Chain IDs:C (auth: A)
Chain Length:234
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:gl12A21 Fab Light Chain
Chain IDs:D (auth: B)
Chain Length:210
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:iv12 Fab Heavy Chain
Chain IDs:A (auth: H)
Chain Length:224
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:iv12 Fab Light Chain
Chain IDs:B (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Development of a VRC01-class germline targeting immunogen derived from anti-idiotypic antibodies.
Cell Rep 35 109084 109084 (2021)
PMID: 33951425 DOI: 10.1016/j.celrep.2021.109084

Abstact

An effective HIV-1 vaccine will likely need to elicit broadly neutralizing antibodies (bNAbs). Broad and potent VRC01-class bNAbs have been isolated from multiple infected individuals, suggesting that they could be reproducibly elicited by vaccination. Several HIV-1 envelope-derived germline-targeting immunogens have been designed to engage naive VRC01-class precursor B cells. However, they also present off-target epitopes that could hinder development of VRC01-class bNAbs. We characterize a panel of anti-idiotypic monoclonal antibodies (ai-mAbs) raised against inferred-germline (iGL) VRC01-class antibodies. By leveraging binding, structural, and B cell sorting data, we engineered a bispecific molecule derived from two ai-mAbs; one specific for VRC01-class heavy chains and one specific for VRC01-class light chains. The bispecific molecule preferentially activates iGL-VRC01 B cells in vitro and induces specific antibody responses in a murine adoptive transfer model with a diverse polyclonal B cell repertoire. This molecule represents an alternative non-envelope-derived germline-targeting immunogen that can selectively activate VRC01-class precursors in vivo.

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Primary Citation of related structures