ISDA

Deposition Date 2020-02-05

Release Date 2021-02-10

Last Version Date 2024-10-23

Entry Detail

PDB ID:

6VQD

Keywords:

IMMUNE SYSTEM

Title:

HLA-B*27:05 presenting an HIV-1 8mer peptide

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Human immunodeficiency virus 1 (Taxon ID: 11676)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.88 Å

R-Value Free:

0.20

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-B
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O78189 Pfam ID:PF00129, PF07654

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61769 Pfam ID:PF07654

Protein Blast

Polymer Type:polypeptide(L)
Molecule:8-mer peptide
Chain IDs:C
Chain Length:8
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1

UniProt ID:P04585

Ligand Molecules

GOL

Primary Citation

Epitope length variants balance protective immune responses and viral escape in HIV-1 infection

Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, McLaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Schild, H, van Endert, P, Harkiolaki, M, Iversen, A.K.Show

Cell Rep 38 ? ? (2022)

DOI: 10.1016/j.celrep.2022.110449

Primary Citation of related structures