6VKQ image
Entry Detail
PDB ID:
6VKQ
Title:
Crystal Structure of human PARP-1 CAT domain bound to inhibitor EB-47
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-01-21
Release Date:
2020-06-17
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.35
R-Value Work:
0.32
R-Value Observed:
0.32
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Poly [ADP-ribose] polymerase 1
Chain IDs:A, B, C, D
Chain Length:372
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Structural basis for allosteric PARP-1 retention on DNA breaks.
Science 368 ? ? (2020)
PMID: 32241924 DOI: 10.1126/science.aax6367

Abstact

The success of poly(ADP-ribose) polymerase-1 (PARP-1) inhibitors (PARPi) to treat cancer relates to their ability to trap PARP-1 at the site of a DNA break. Although different forms of PARPi all target the catalytic center of the enzyme, they have variable abilities to trap PARP-1. We found that several structurally distinct PARPi drive PARP-1 allostery to promote release from a DNA break. Other inhibitors drive allostery to retain PARP-1 on a DNA break. Further, we generated a new PARPi compound, converting an allosteric pro-release compound to a pro-retention compound and increasing its ability to kill cancer cells. These developments are pertinent to clinical applications where PARP-1 trapping is either desirable or undesirable.

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