6VD9 image
Deposition Date 2019-12-23
Release Date 2020-06-24
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6VD9
Title:
Metal-bound C-terminal domain of the CzcD transporter from Cuprividus metallidurans
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Metal cation efflux system protein CzcD
Gene (Uniprot):czcD
Chain IDs:A, B, C, D
Chain Length:75
Number of Molecules:4
Biological Source:Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Primary Citation
Structural and functional characterizations of the C-terminal domains of CzcD proteins.
J.Inorg.Biochem. 208 111087 111087 (2020)
PMID: 32505855 DOI: 10.1016/j.jinorgbio.2020.111087

Abstact

Zinc is a potent antimicrobial component of the innate immune response at the host-pathogen interface. Bacteria subvert or resist host zinc insults by metal efflux pathways that include cation diffusion facilitator (CDF) proteins. The structural and functional examination of this protein class has been limited, with only the structures of the zinc transporter YiiP proteins from E. coli and Shewanella oneidensis described to date. Here, we determine the metal binding properties, solution quaternary structures and three dimensional architectures of the C-terminal domains of the metal transporter CzcD proteins from Cupriavidus metallidurans, Pseudomonas aeruginosa and Thermotoga maritima. We reveal significant diversity in the metal-binding properties and structures of these proteins and discover a potential novel mechanism for metal-promoted dimerization for the Cupriavidus metallidurans and Pseudomonas aeruginosa proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures