6VBW image
Deposition Date 2019-12-19
Release Date 2020-01-29
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6VBW
Keywords:
IMMUNE SYSTEM
Title:
Cryo-EM structure of Cascade-TniQ-dsDNA ternary complex
Biological Source:
Source Organism:
Vibrio cholerae (Taxon ID: 666)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
6VBW validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cas8
Chain IDs:D (auth: A)
Chain Length:640
Number of Molecules:1
Biological Source:Vibrio cholerae
UniProt ID:A0A6I8WFX4 Pfam ID:PF09614
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cas7
Chain IDs:E (auth: B), F (auth: C), G (auth: D), H (auth: F), I (auth: E), J (auth: G)
Chain Length:352
Number of Molecules:6
Biological Source:Vibrio cholerae
UniProt ID:A0A6I8WFX5 Pfam ID:PF09615
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cas6
Chain IDs:K (auth: H)
Chain Length:199
Number of Molecules:1
Biological Source:Vibrio cholerae
UniProt ID:A0A6I8WFX3 Pfam ID:PF09618
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TniQ
Chain IDs:L (auth: I), M (auth: J)
Chain Length:394
Number of Molecules:2
Biological Source:Vibrio cholerae
UniProt ID:A0A6I8WFX7 Pfam ID:PF06527
Polymer Type:polyribonucleotide
Molecule:RNA (61-MER)
Chain IDs:C (auth: K)
Chain Length:61
Number of Molecules:1
Biological Source:Vibrio cholerae
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (100-MER)
Chain IDs:B (auth: L)
Chain Length:100
Number of Molecules:1
Biological Source:Vibrio cholerae
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*CP*AP*GP*TP*CP*AP*TP*CP*AP*CP*CP*AP*AP*TP*TP*TP*AP*TP*TP*TP*A)-3')
Chain IDs:A (auth: M)
Chain Length:22
Number of Molecules:1
Biological Source:Vibrio cholerae
Ligand Molecules
ZN
Primary Citation
Structure-function insights into the initial step of DNA integration by a CRISPR-Cas-Transposon complex.
Cell Res. 30 182 184 (2020)
PMID: 31925391 DOI: 10.1038/s41422-019-0272-2
Primary Citation of related structures
6VBW