6V9I image
Entry Detail
PDB ID:
6V9I
EMDB ID:
Keywords:
Title:
cryo-EM structure of Cullin5 bound to RING-box protein 2 (Cul5-Rbx2)
Biological Source:
PDB Version:
Deposition Date:
2019-12-13
Release Date:
2020-04-29
Method Details:
Experimental Method:
Resolution:
5.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Immunoglobulin G-binding protein G,Cullin-5
Chain IDs:A (auth: C)
Chain Length:863
Number of Molecules:1
Biological Source:Streptococcus sp. group G, Homo sapiens
Polymer Type:polypeptide(L)
Description:RING-box protein 2
Chain IDs:B (auth: R)
Chain Length:113
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structure and dynamics of the ASB9 CUL-RING E3 Ligase.
Nat Commun 11 2866 2866 (2020)
PMID: 32513959 DOI: 10.1038/s41467-020-16499-9

Abstact

The Cullin 5 (CUL5) Ring E3 ligase uses adaptors Elongins B and C (ELOB/C) to bind different SOCS-box-containing substrate receptors, determining the substrate specificity of the ligase. The 18-member ankyrin and SOCS box (ASB) family is the largest substrate receptor family. Here we report cryo-EM data for the substrate, creatine kinase (CKB) bound to ASB9-ELOB/C, and for full-length CUL5 bound to the RING protein, RBX2, which binds various E2s. To date, no full structures are available either for a substrate-bound ASB nor for CUL5. Hydrogen-deuterium exchange (HDX-MS) mapped onto a full structural model of the ligase revealed long-range allostery extending from the substrate through CUL5. We propose a revised allosteric mechanism for how CUL-E3 ligases function. ASB9 and CUL5 behave as rigid rods, connected through a hinge provided by ELOB/C transmitting long-range allosteric crosstalk from the substrate through CUL5 to the RBX2 flexible linker.

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