6V6N image
Deposition Date 2019-12-05
Release Date 2019-12-18
Last Version Date 2025-04-02
Entry Detail
PDB ID:
6V6N
Keywords:
HYDROLASE
Title:
The crystal structure of a class D beta-lactamase from Agrobacterium tumefaciens
Biological Source:
Source Organism:
Rhizobium radiobacter (Taxon ID: 358)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.85 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
6V6N validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-lactamase
Gene (Uniprot):blaOXA
Mutations:D195Y
Chain IDs:A, B, C, D
Chain Length:251
Number of Molecules:4
Biological Source:Rhizobium radiobacter
UniProt ID:A0A1V2APZ1 Pfam ID:PF00905
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KCX A LYS modified residue
MSE A MET modified residue
Ligand Molecules
FMT
GOL
SO4
Primary Citation
The crystal structure of a class D beta-lactamase from Agrobacterium tumefaciens
To Be Published ? ? ? (?)
Primary Citation of related structures
6V6N