6V4M image
Deposition Date 2019-11-28
Release Date 2020-10-07
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6V4M
Keywords:
Title:
Trichuris suis BCL-2
Biological Source:
Source Organism:
Trichuris suis (Taxon ID: 68888)
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BCL-2
Gene (Uniprot):M513_07322, M514_07322
Chain IDs:A
Chain Length:174
Number of Molecules:1
Biological Source:Trichuris suis
Primary Citation
Diversity in the intrinsic apoptosis pathway of nematodes.
Commun Biol 3 478 478 (2020)
PMID: 32859965 DOI: 10.1038/s42003-020-01208-5

Abstact

Early studies of the free-living nematode C. elegans informed us how BCL-2-regulated apoptosis in humans is regulated. However, subsequent studies showed C. elegans apoptosis has several unique features compared with human apoptosis. To date, there has been no detailed analysis of apoptosis regulators in nematodes other than C. elegans. Here, we discovered BCL-2 orthologues in 89 free-living and parasitic nematode taxa representing four evolutionary clades (I, III, IV and V). Unlike in C. elegans, 15 species possess multiple (two to five) BCL-2-like proteins, and some do not have any recognisable BCL-2 sequences. Functional studies provided no evidence that BAX/BAK proteins have evolved in nematodes, and structural studies of a BCL-2 protein from the basal clade I revealed it lacks a functionally important feature of the C. elegans orthologue. Clade I CED-4/APAF-1 proteins also possess WD40-repeat sequences associated with apoptosome assembly, not present in C. elegans, or other nematode taxa studied.

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Primary Citation of related structures