6V4F image
Deposition Date 2019-11-27
Release Date 2020-04-22
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6V4F
Keywords:
Title:
Crystal Structure Analysis of Zebra Fish MDMX
Biological Source:
Source Organism:
Danio rerio (Taxon ID: 7955)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein Mdm4
Gene (Uniprot):mdm4
Mutations:L46V, V95L
Chain IDs:A
Chain Length:104
Number of Molecules:1
Biological Source:Danio rerio
Polymer Type:polypeptide(L)
Molecule:Stapled Peptide LSQETF(0EH)DLWKLE(MK8)EN(NH2)
Chain IDs:B
Chain Length:17
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Identification of a Structural Determinant for Selective Targeting of HDMX.
Structure 28 847 857.e5 (2020)
PMID: 32359398 DOI: 10.1016/j.str.2020.04.011

Abstact

p53 is a critical tumor-suppressor protein that guards the human genome against mutations by inducing cell-cycle arrest or apoptosis. Cancer cells subvert p53 by deletion, mutation, or overexpression of the negative regulators HDM2 and HDMX. For tumors that retain wild-type p53, its reactivation by pharmacologic targeting of HDM2 and/or HDMX represents a promising strategy, with a series of selective small-molecule HDM2 inhibitors and a dual HDM2/HDMX stapled-peptide inhibitor being evaluated in clinical trials. Because selective HDM2 targeting can cause hematologic toxicity, selective HDMX inhibitors could provide an alternative p53-reactivation strategy, but clinical candidates remain elusive. Here, we applied a mutation-scanning approach to uncover p53-based stapled peptides that are selective for HDMX. Crystal structures of stapled-peptide/HDMX complexes revealed a molecular mechanism for the observed specificity, which was validated by HDMX mutagenesis. Thus, we provide a blueprint for the development of HDMX-selective inhibitors to dissect and target the p53/HDMX interaction.

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Primary Citation of related structures