6V13 image
Entry Detail
PDB ID:
6V13
Keywords:
Title:
immune receptor complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-11-19
Release Date:
2020-11-25
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HLA class II histocompatibility antigen, DR alpha chain
Chain IDs:A
Chain Length:189
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:HLA class II histocompatibility antigen, DRB1-4 beta chain
Chain IDs:B
Chain Length:198
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Fibrinogen beta 74cit69-81
Chain IDs:C
Chain Length:13
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:G08 TCR alpha chain
Chain IDs:D
Chain Length:206
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:G08 TCR beta chain
Chain IDs:E
Chain Length:241
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR.
Sci Immunol 6 ? ? (2021)
PMID: 33863750 DOI: 10.1126/sciimmunol.abe0896

Abstact

Individuals expressing HLA-DR4 bearing the shared susceptibility epitope (SE) have an increased risk of developing rheumatoid arthritis (RA). Posttranslational modification of self-proteins via citrullination leads to the formation of neoantigens that can be presented by HLA-DR4 SE allomorphs. However, in T cell-mediated autoimmunity, the interplay between the HLA molecule, posttranslationally modified epitope(s), and the responding T cell repertoire remains unclear. In HLA-DR4 transgenic mice, we show that immunization with a Fibβ-74cit69-81 peptide led to a population of HLA-DR4Fibβ-74cit69-81 tetramer+ T cells that exhibited biased T cell receptor (TCR) β chain usage, which was attributable to selective clonal expansion from the preimmune repertoire. Crystal structures of pre- and postimmune TCRs showed that the SE of HLA-DR4 represented a main TCR contact zone. Immunization with a double citrullinated epitope (Fibβ-72,74cit69-81) altered the responding HLA-DR4 tetramer+ T cell repertoire, which was due to the P2-citrulline residue interacting with the TCR itself. We show that the SE of HLA-DR4 has dual functionality, namely, presentation and a direct TCR recognition determinant. Analogous biased TCR β chain usage toward the Fibβ-74cit69-81 peptide was observed in healthy HLA-DR4+ individuals and patients with HLA-DR4+ RA, thereby suggesting a link to human RA.

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Primary Citation of related structures