6UXX image
Entry Detail
PDB ID:
6UXX
Title:
PRMT5:MEP50 Complexed with Allosteric Inhibitor Compound 1a
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-11-08
Release Date:
2020-08-19
Method Details:
Experimental Method:
Resolution:
2.69 Å
R-Value Free:
0.27
R-Value Work:
0.25
R-Value Observed:
0.26
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Protein arginine N-methyltransferase 5
Chain IDs:A
Chain Length:645
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Methylosome protein 50
Chain IDs:B
Chain Length:350
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Allosteric Modulation of Protein Arginine Methyltransferase 5 (PRMT5).
Acs Med.Chem.Lett. 11 1688 1693 (2020)
PMID: 32944135 DOI: 10.1021/acsmedchemlett.9b00525

Abstact

Protein arginine methyltransferase 5 (PRMT5) belongs to a family of enzymes that regulate the posttranslational modification of histones and other proteins via methylation of arginine. Methylation of histones is linked to an increase in transcription and regulates a manifold of functions such as signal transduction and transcriptional regulation. PRMT5 has been shown to be upregulated in the tumor environment of several cancer types, and the inhibition of PRMT5 activity was identified as a potential way to reduce tumor growth. Previously, four different modes of PRMT5 inhibition were known-competing (covalently or non-covalently) with the essential cofactor S-adenosyl methionine (SAM), blocking the substrate binding pocket, or blocking both simultaneously. Herein we describe an unprecedented conformation of PRMT5 in which the formation of an allosteric binding pocket abrogates the enzyme's canonical binding site and present the discovery of potent small molecule allosteric PRMT5 inhibitors.

Legend

Protein

Chemical

Disease

Primary Citation of related structures