6UTC image
Deposition Date 2019-10-29
Release Date 2020-06-17
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6UTC
Title:
Intra-chain disulfide bonded ToxR periplasmic domain from Vibrio vulnificus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.25 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transcriptional activator ToxR
Gene (Uniprot):toxR
Chain IDs:A
Chain Length:104
Number of Molecules:1
Biological Source:Vibrio vulnificus
Ligand Molecules
Primary Citation
A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts.
Sci Rep 10 9002 9002 (2020)
PMID: 32488093 DOI: 10.1038/s41598-020-66050-5

Abstact

ToxR is a transmembrane transcription factor that, together with its integral membrane periplasmic binding partner ToxS, is conserved across the Vibrionaceae family. In some pathogenic Vibrios, including V. parahaemolyticus and V. cholerae, ToxR is required for bile resistance and virulence, and ToxR is fully activated and protected from degradation by ToxS. ToxS achieves this in part by ensuring formation of an intra-chain disulfide bond in the C-terminal periplasmic domain of ToxR (dbToxRp). In this study, biochemical analysis showed dbToxRp to have a higher affinity for the ToxS periplasmic domain than the non-disulfide bonded conformation. Analysis of our dbToxRp crystal structure showed this is due to disulfide bond stabilization. Furthermore, dbToxRp is structurally homologous to the V. parahaemolyticus VtrA periplasmic domain. These results highlight the critical structural role of disulfide bond in ToxR and along with VtrA define a domain fold involved in environmental sensing conserved across the Vibrionaceae family.

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Primary Citation of related structures