6UT2 image
Deposition Date 2019-10-29
Release Date 2020-09-30
Last Version Date 2024-05-01
Entry Detail
PDB ID:
6UT2
Title:
3D structure of the leiomodin/tropomyosin binding interface
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
10
Selection Criteria:
structures with acceptable covalent geometry
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Leiomodin-2
Gene (Uniprot):LMOD2
Chain IDs:A
Chain Length:40
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Tropomyosin alpha-1 chain chimeric peptide
Gene (Uniprot):TPM1
Chain IDs:B, C
Chain Length:33
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Leiomodin creates a leaky cap at the pointed end of actin-thin filaments.
Plos Biol. 18 e3000848 e3000848 (2020)
PMID: 32898131 DOI: 10.1371/journal.pbio.3000848

Abstact

Improper lengths of actin-thin filaments are associated with altered contractile activity and lethal myopathies. Leiomodin, a member of the tropomodulin family of proteins, is critical in thin filament assembly and maintenance; however, its role is under dispute. Using nuclear magnetic resonance data and molecular dynamics simulations, we generated the first atomic structural model of the binding interface between the tropomyosin-binding site of cardiac leiomodin and the N-terminus of striated muscle tropomyosin. Our structural data indicate that the leiomodin/tropomyosin complex only forms at the pointed end of thin filaments, where the tropomyosin N-terminus is not blocked by an adjacent tropomyosin protomer. This discovery provides evidence supporting the debated mechanism where leiomodin and tropomodulin regulate thin filament lengths by competing for thin filament binding. Data from experiments performed in cardiomyocytes provide additional support for the competition model; specifically, expression of a leiomodin mutant that is unable to interact with tropomyosin fails to displace tropomodulin at thin filament pointed ends and fails to elongate thin filaments. Together with previous structural and biochemical data, we now propose a molecular mechanism of actin polymerization at the pointed end in the presence of bound leiomodin. In the proposed model, the N-terminal actin-binding site of leiomodin can act as a "swinging gate" allowing limited actin polymerization, thus making leiomodin a leaky pointed-end cap. Results presented in this work answer long-standing questions about the role of leiomodin in thin filament length regulation and maintenance.

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