6ULZ image
Deposition Date 2019-10-08
Release Date 2020-02-19
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6ULZ
Title:
Adenylation domain of the initiation module of LgrA mutant P483M
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Linear gramicidin synthase subunit A
Gene (Uniprot):lgrA
Mutagens:P483M
Chain IDs:A
Chain Length:687
Number of Molecules:1
Biological Source:Brevibacillus parabrevis
Primary Citation
Structural basis of keto acid utilization in nonribosomal depsipeptide synthesis.
Nat.Chem.Biol. 16 493 496 (2020)
PMID: 32066969 DOI: 10.1038/s41589-020-0481-5

Abstact

Nonribosomal depsipeptides are natural products composed of amino and hydroxy acid residues. The hydroxy acid residues often derive from α-keto acids, reduced by ketoreductase domains in the depsipeptide synthetases. Biochemistry and structures reveal the mechanism of discrimination for α-keto acids and a remarkable architecture: flanking intact adenylation and ketoreductase domains are sequences separated by >1,100 residues that form a split 'pseudoAsub' domain, structurally important for the depsipeptide module's synthetic cycle.

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Primary Citation of related structures
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