6UBS image
Deposition Date 2019-09-12
Release Date 2020-07-29
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6UBS
Title:
Full length Glycine receptor reconstituted in lipid nanodisc in Apo/Resting conformation
Biological Source:
Source Organism:
Danio rerio (Taxon ID: 7955)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.33 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycine receptor subunit alphaZ1
Gene (Uniprot):glra1
Chain IDs:A, B, C, D, E
Chain Length:444
Number of Molecules:5
Biological Source:Danio rerio
Primary Citation
Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs.
Nat Commun 11 3752 3752 (2020)
PMID: 32719334 DOI: 10.1038/s41467-020-17364-5

Abstact

Glycinergic synapses play a central role in motor control and pain processing in the central nervous system. Glycine receptors (GlyRs) are key players in mediating fast inhibitory neurotransmission at these synapses. While previous high-resolution structures have provided insights into the molecular architecture of GlyR, several mechanistic questions pertaining to channel function are still unanswered. Here, we present Cryo-EM structures of the full-length GlyR protein complex reconstituted into lipid nanodiscs that are captured in the unliganded (closed), glycine-bound (open and desensitized), and allosteric modulator-bound conformations. A comparison of these states reveals global conformational changes underlying GlyR channel gating and modulation. The functional state assignments were validated by molecular dynamics simulations, and the observed permeation events are in agreement with the anion selectivity and conductance of GlyR. These studies provide the structural basis for gating, ion selectivity, and single-channel conductance properties of GlyR in a lipid environment.

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