6U9E image
Deposition Date 2019-09-08
Release Date 2019-10-23
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6U9E
Title:
Structure of PdpA-VgrG Complex, Lidless
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.21 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PdpA
Gene (Uniprot):pdpA
Chain IDs:A, B (auth: C), C (auth: E)
Chain Length:820
Number of Molecules:3
Biological Source:Francisella novicida
Polymer Type:polypeptide(L)
Molecule:VgrG
Chain IDs:D (auth: B), E (auth: D), F
Chain Length:189
Number of Molecules:3
Biological Source:Francisella novicida
Ligand Molecules
Primary Citation
Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure 27 1811 1819.e6 (2019)
PMID: 31677891 DOI: 10.1016/j.str.2019.10.007

Abstact

Francisella bacteria rely on a phylogenetically distinct type VI secretion system (T6SS) to escape host phagosomes and cause the fatal disease tularemia, but the structural and molecular mechanisms involved are unknown. Here we report the atomic structure of the Francisella T6SS central spike complex, obtained by cryo-electron microscopy. Our structural and functional studies demonstrate that, unlike the single-protein spike composition of other T6SS subtypes, Francisella T6SS's central spike is formed by two proteins, PdpA and VgrG, akin to T4-bacteriophage gp27 and gp5, respectively, and that PdpA has unique characteristics, including a putative cargo within its cavity and an N-terminal helical lid. Structure-guided mutagenesis demonstrates that the PdpA N-terminal lid and C-terminal spike are essential to Francisella T6SS function. PdpA is thus both an adaptor, connecting VgrG to the tube, and a likely carrier of secreted cargo. These findings are important to understanding Francisella pathogenicity and designing therapeutics to combat tularemia.

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Disease

Primary Citation of related structures