6U6P image
Entry Detail
PDB ID:
6U6P
Keywords:
Title:
Solution NMR Structure Of The Full Length Latent Form MinE Protein From Neisseria gonorrheae
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-08-30
Release Date:
2020-07-08
Method Details:
Experimental Method:
Conformers Calculated:
20000
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cell division topological specificity factor
Chain IDs:A, B
Chain Length:81
Number of Molecules:2
Biological Source:Neisseria gonorrhoeae
Ligand Molecules
Primary Citation
Probing transient excited states of the bacterial cell division regulator MinE by relaxation dispersion NMR spectroscopy.
Proc.Natl.Acad.Sci.USA 116 25446 25455 (2019)
PMID: 31772021 DOI: 10.1073/pnas.1915948116

Abstact

Bacterial MinD and MinE form a standing oscillatory wave which positions the cell division inhibitor MinC, that binds MinD, everywhere on the membrane except at the midpoint of the cell, ensuring midcell positioning of the cytokinetic septum. During this process MinE undergoes fold switching as it interacts with different partners. We explore the exchange dynamics between major and excited states of the MinE dimer in 3 forms using 15N relaxation dispersion NMR: the full-length protein (6-stranded β-sheet sandwiched between 4 helices) representing the resting state; a 10-residue N-terminal deletion (Δ10) mimicking the membrane-binding competent state where the N-terminal helix is detached to interact with membrane; and N-terminal deletions of either 30 (Δ30) or 10 residues with an I24N mutation (Δ10/I24N), in which the β1-strands at the dimer interface are extruded and available to bind MinD, leaving behind a 4-stranded β-sheet. Full-length MinE samples 2 "excited" states: The first is similar to a full-length/Δ10 heterodimer; the second, also sampled by Δ10, is either similar to or well along the pathway toward the 4-stranded β-sheet form. Both Δ30 and Δ10/I24N sample 2 excited species: The first may involve destabilization of the β3- and β3'-strands at the dimer interface; changes in the second are more extensive, involving further disruption of secondary structure, possibly representing an ensemble of states on the pathway toward restoration of the resting state. The quantitative information on MinE conformational dynamics involving these excited states is crucial for understanding the oscillation pattern self-organization by MinD-MinE interaction dynamics on the membrane.

Legend

Protein

Chemical

Disease

Primary Citation of related structures