6U6A image
Deposition Date 2019-08-29
Release Date 2019-10-30
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6U6A
Title:
Crystal structure of Yck2 from Candida albicans in complex with kinase inhibitor GW461484A
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
H 3
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serine/threonine protein kinase
Gene (Uniprot):YCK2
Chain IDs:A
Chain Length:309
Number of Molecules:1
Biological Source:Candida albicans SC5314
Primary Citation
Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2.
Cell Chem Biol 27 269 282.e5 (2020)
PMID: 31924499 DOI: 10.1016/j.chembiol.2019.12.008

Abstact

New strategies are urgently needed to counter the threat to human health posed by drug-resistant fungi. To explore an as-yet unexploited target space for antifungals, we screened a library of protein kinase inhibitors for the ability to reverse resistance of the most common human fungal pathogen, Candida albicans, to caspofungin, a widely used antifungal. This screen identified multiple 2,3-aryl-pyrazolopyridine scaffold compounds capable of restoring caspofungin sensitivity. Using chemical genomic, biochemical, and structural approaches, we established the target for our most potent compound as Yck2, a casein kinase 1 family member. Combination of this compound with caspofungin eradicated drug-resistant C. albicans infection while sparing co-cultured human cells. In mice, genetic depletion of YCK2 caused an ∼3-log10 decline in fungal burden in a model of systemic caspofungin-resistant C. albicans infection. Structural insights and our tool compound's profile in culture support targeting the Yck2 kinase function as a broadly active antifungal strategy.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback