6U3V image
Entry Detail
PDB ID:
6U3V
Title:
Crystal structure of human alpha/epsilon-COP of the COPI vesicular coat bound to alpha-COP STM1
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-08-22
Release Date:
2019-11-13
Method Details:
Experimental Method:
Resolution:
2.96 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Coatomer subunit epsilon
Chain IDs:A, C
Chain Length:322
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Coatomer subunit alpha
Mutations:deletion 854-887
Chain IDs:B, D
Chain Length:356
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Roles of singleton tryptophan motifs in COPI coat stability and vesicle tethering.
Proc.Natl.Acad.Sci.USA 116 24031 24040 (2019)
PMID: 31712447 DOI: 10.1073/pnas.1909697116

Abstact

Coat protein I (COPI)-coated vesicles mediate retrograde transport from the Golgi to the endoplasmic reticulum (ER), as well as transport within the Golgi. Major progress has been made in defining the structure of COPI coats, in vitro and in vivo, at resolutions as high as 9 Å. Nevertheless, important questions remain unanswered, including what specific interactions stabilize COPI coats, how COPI vesicles recognize their target membranes, and how coat disassembly is coordinated with vesicle fusion and cargo delivery. Here, we use X-ray crystallography to identify a conserved site on the COPI subunit α-COP that binds to flexible, acidic sequences containing a single tryptophan residue. One such sequence, found within α-COP itself, mediates α-COP homo-oligomerization. Another such sequence is contained within the lasso of the ER-resident Dsl1 complex, where it helps mediate the tethering of Golgi-derived COPI vesicles at the ER membrane. Together, our findings suggest that α-COP homo-oligomerization plays a key role in COPI coat stability, with potential implications for the coordination of vesicle tethering, uncoating, and fusion.

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