6TWG image
Entry Detail
PDB ID:
6TWG
Title:
Solution structure of antimicrobial peptide, crabrolin Plus in the presence of Lipopolysaccharide
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-01-13
Release Date:
2020-07-22
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Crabrolin Plus, mutant of Crabrolin peptide
Mutations:L4K, T11R
Chain IDs:A
Chain Length:13
Number of Molecules:1
Biological Source:Vespa crabro
Ligand Molecules
Primary Citation
Effect of positive charges in the structural interaction of crabrolin isoforms with lipopolysaccharide.
J.Pept.Sci. 26 e3271 e3271 (2020)
PMID: 32585759 DOI: 10.1002/psc.3271

Abstact

Antimicrobial peptides (AMPs) appear as chemical compounds of increasing interest for their role in killing bacteria and, more recently, for their ability to bind endotoxin (lipopolysaccharide, LPS) that is released during bacterial infection and that may lead to septic shock. This dual role in the mechanism of action can further be enhanced in a synergistic way when two or more AMPs are combined together. Not all AMPs are able to bind LPS, suggesting that several modes of binding to the bacterial surface may exist. Here we analyze a natural AMP, crabrolin, and two mutated forms, one with increased positive charge (Crabrolin Plus) and the other with null charge (Crabrolin Minus), and compare their binding abilities to LPS. While Crabrolin WT as well Crabrolin Minus do not show binding to LPS, the mutated Crabrolin Plus exhibits binding and forms a well defined structure in the presence of LPS. The results strengthen the importance of positive charges for the binding to LPS and suggest the mutated form with increased positive charge as a promising candidate for antimicrobial and antiseptic activity.

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Primary Citation of related structures