6TVP image
Deposition Date 2020-01-10
Release Date 2020-04-22
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6TVP
Title:
Structure of Mycobacterium smegmatis alpha-maltose-1-phosphate synthase GlgM
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alpha-maltose-1-phosphate synthase
Gene (Uniprot):glgM
Chain IDs:A, B
Chain Length:401
Number of Molecules:2
Biological Source:Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Ligand Molecules
Primary Citation
Structure of the Mycobacterium smegmatis alpha-maltose-1-phosphate synthase GlgM.
Acta Crystallogr.,Sect.F 76 175 181 (2020)
PMID: 32254051 DOI: 10.1107/S2053230X20004343

Abstact

Mycobacterium tuberculosis produces glycogen (also known as α-glucan) to help evade human immunity. This pathogen uses the GlgE pathway to generate glycogen rather than the more well known glycogen synthase GlgA pathway, which is absent in this bacterium. Thus, the building block for this glucose polymer is α-maltose-1-phosphate rather than an NDP-glucose donor. One of the routes to α-maltose-1-phosphate is now known to involve the GlgA homologue GlgM, which uses ADP-glucose as a donor and α-glucose-1-phosphate as an acceptor. To help compare GlgA (a GT5 family member) with GlgM enzymes (GT4 family members), the X-ray crystal structure of GlgM from Mycobacterium smegmatis was solved to 1.9 Å resolution. While the enzymes shared a GT-B fold and several residues responsible for binding the donor substrate, they differed in some secondary-structural details, particularly in the N-terminal domain, which would be expected to be largely responsible for their different acceptor-substrate specificities.

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Primary Citation of related structures