6TQF image
Entry Detail
PDB ID:
6TQF
EMDB ID:
Title:
The structure of ABC transporter Rv1819c in AMP-PNP bound state
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2019-12-16
Release Date:
2020-04-01
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ABC transporter ATP-binding protein/permease
Chain IDs:A, B
Chain Length:647
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis
Primary Citation
A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds.
Nature 580 409 412 (2020)
PMID: 32296172 DOI: 10.1038/s41586-020-2072-8

Abstact

Mycobacterium tuberculosis (Mtb) is an obligate human pathogen and the causative agent of tuberculosis1-3. Although Mtb can synthesize vitamin B12 (cobalamin) de novo, uptake of cobalamin has been linked to pathogenesis of tuberculosis2. Mtb does not encode any characterized cobalamin transporter4-6; however, the gene rv1819c was found to be essential for uptake of cobalamin1. This result is difficult to reconcile with the original annotation of Rv1819c as a protein implicated in the transport of antimicrobial peptides such as bleomycin7. In addition, uptake of cobalamin seems inconsistent with the amino acid sequence, which suggests that Rv1819c has a bacterial ATP-binding cassette (ABC)-exporter fold1. Here, we present structures of Rv1819c, which reveal that the protein indeed contains the ABC-exporter fold, as well as a large water-filled cavity of about 7,700 Å3, which enables the protein to transport the unrelated hydrophilic compounds bleomycin and cobalamin. On the basis of these structures, we propose that Rv1819c is a multi-solute transporter for hydrophilic molecules, analogous to the multidrug exporters of the ABC transporter family, which pump out structurally diverse hydrophobic compounds from cells8-11.

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