6TMJ image
Deposition Date 2019-12-04
Release Date 2020-12-16
Last Version Date 2024-05-22
Entry Detail
PDB ID:
6TMJ
Title:
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator model
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:subunit c
Gene (Uniprot):TGGT1_249720
Chain IDs:F (auth: H2), G (auth: I2), H (auth: J2), I (auth: K2), J (auth: M2), K (auth: N2), L (auth: O2), M (auth: P2), N (auth: Q2), O (auth: L2)
Chain Length:166
Number of Molecules:10
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:subunit a
Gene (Uniprot):TGGT1_310360
Chain IDs:B (auth: K)
Chain Length:224
Number of Molecules:1
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATPTG11
Gene (Uniprot):TGGT1_263990
Chain IDs:A (auth: Q)
Chain Length:134
Number of Molecules:1
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP synthase subunit delta
Gene (Uniprot):TGGT1_226000
Chain IDs:D (auth: d2)
Chain Length:183
Number of Molecules:1
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP synthase subunit epsilon
Gene (Uniprot):TGGT1_314820
Chain IDs:E (auth: e2)
Chain Length:73
Number of Molecules:1
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP synthase subunit gamma
Gene (Uniprot):TGGT1_231910
Chain IDs:C (auth: g2)
Chain Length:314
Number of Molecules:1
Biological Source:Toxoplasma gondii (strain ATCC 50853 / GT1)
Ligand Molecules
Primary Citation
ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun 12 120 120 (2021)
PMID: 33402698 DOI: 10.1038/s41467-020-20381-z

Abstact

Mitochondrial ATP synthase plays a key role in inducing membrane curvature to establish cristae. In Apicomplexa causing diseases such as malaria and toxoplasmosis, an unusual cristae morphology has been observed, but its structural basis is unknown. Here, we report that the apicomplexan ATP synthase assembles into cyclic hexamers, essential to shape their distinct cristae. Cryo-EM was used to determine the structure of the hexamer, which is held together by interactions between parasite-specific subunits in the lumenal region. Overall, we identified 17 apicomplexan-specific subunits, and a minimal and nuclear-encoded subunit-a. The hexamer consists of three dimers with an extensive dimer interface that includes bound cardiolipins and the inhibitor IF1. Cryo-ET and subtomogram averaging revealed that hexamers arrange into ~20-megadalton pentagonal pyramids in the curved apical membrane regions. Knockout of the linker protein ATPTG11 resulted in the loss of pentagonal pyramids with concomitant aberrantly shaped cristae. Together, this demonstrates that the unique macromolecular arrangement is critical for the maintenance of cristae morphology in Apicomplexa.

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Primary Citation of related structures