6TG0 image
Entry Detail
PDB ID:
6TG0
Keywords:
Title:
Crystal Structure of EGFR T790M/V948R in Complex with Covalent Pyrrolopyrimidine 21a
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-11-14
Release Date:
2020-09-30
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.18
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Epidermal growth factor receptor
Mutations:T790M, V948R
Chain IDs:A, B
Chain Length:333
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Targeting Her2-insYVMA with Covalent Inhibitors-A Focused Compound Screening and Structure-Based Design Approach.
J.Med.Chem. 63 11725 11755 (2020)
PMID: 32931277 DOI: 10.1021/acs.jmedchem.0c00870

Abstact

Mutated or amplified Her2 serves as a driver of non-small cell lung cancer or mediates resistance toward the inhibition of its family member epidermal growth factor receptor with small-molecule inhibitors. To date, small-molecule inhibitors targeting Her2 which can be used in clinical routine are lacking, and therefore, the development of novel inhibitors was undertaken. In this study, the well-established pyrrolopyrimidine scaffold was modified with structural motifs identified from a screening campaign with more than 1600 compounds, which were applied against wild-type Her2 and its mutant variant Her2-A775_G776insYVMA. The resulting inhibitors were designed to covalently target a reactive cysteine in the binding site of Her2 and were further optimized by means of structure-based drug design utilizing a set of obtained complex crystal structures. In addition, the analysis of binding kinetics and absorption, distribution, metabolism, and excretion parameters as well as mass spectrometry experiments and western blot analysis substantiated our approach.

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