6T8A image
Entry Detail
PDB ID:
6T8A
Keywords:
HYDROLASE
Title:
Thrombin in complex with diphenyl ((4-carbamimidoylphenyl)((S)-1-((R)-3-cyclohexyl 2-((phenylmethyl)sulfonamido)propanoyl)pyrrolidine-2-carboxamido)methyl)phosphonate (MI-492)
Biological Source:
Source Organism:
Hirudo medicinalis, Homo sapiens
PDB Version:
Deposition Date:
2019-10-24
Release Date:
2020-11-18
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.62 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.16
Space Group:
C 1 2 1
6T8A validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Prothrombin
Chain IDs:B (auth: H)
Chain Length:259
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00734 Pfam ID:PF00089, PF09396 EC:3.4.21.5
Protein Blast
Polymer Type:polypeptide(L)
Description:Hirudin variant-2
Chain IDs:C (auth: I)
Chain Length:11
Number of Molecules:1
Biological Source:Hirudo medicinalis
UniProt ID:P09945 EC:3.4.21.5
Protein Blast
Polymer Type:polypeptide(L)
Description:Prothrombin
Chain IDs:A (auth: L)
Chain Length:36
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00734 Pfam ID:PF00089, PF09396 EC:3.4.21.5
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TYS C TYR modified residue
Ligand Molecules
DMS
MUZ
NA
NAG
PO4
Primary Citation
Thrombin in complex with diphenyl ((4-carbamimidoylphenyl)((S)-1-((R)-3-cyclohexyl-2-((phenylmethyl)sulfonamido)propanoyl)pyrrolidine-2-carboxamido)methyl)phosphonate (MI-492)
to be published ? ? ? (?)
Primary Citation of related structures
6T8A