6T7J image
Entry Detail
PDB ID:
6T7J
Keywords:
Title:
As-isolated Ni-free crystal structure of carbon monoxide dehydrogenase from Thermococcus sp. AM4 produced without CooC maturase
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2019-10-22
Release Date:
2020-11-18
Method Details:
Experimental Method:
Resolution:
2.43 Å
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Carbon monoxide dehydrogenase
Chain IDs:A (auth: B), B (auth: A), C (auth: D)
Chain Length:632
Number of Molecules:3
Biological Source:Thermococcus sp. AM4
Primary Citation
The two CO-dehydrogenases of Thermococcus sp. AM4.
Biochim Biophys Acta Bioenerg 1861 148188 148188 (2020)
PMID: 32209322 DOI: 10.1016/j.bbabio.2020.148188

Abstact

Ni-containing CO-dehydrogenases (CODHs) allow some microorganisms to couple ATP synthesis to CO oxidation, or to use either CO or CO2 as a source of carbon. The recent detailed characterizations of some of them have evidenced a great diversity in terms of catalytic properties and resistance to O2. In an effort to increase the number of available CODHs, we have heterologously produced in Desulfovibrio fructosovorans, purified and characterized the two CooS-type CODHs (CooS1 and CooS2) from the hyperthermophilic archaeon Thermococcus sp. AM4 (Tc). We have also crystallized CooS2, which is coupled in vivo to a hydrogenase. CooS1 and CooS2 are homodimers, and harbour five metalloclusters: two [Ni4Fe-4S] C clusters, two [4Fe-4S] B clusters and one interfacial [4Fe-4S] D cluster. We show that both are dependent on a maturase, CooC1 or CooC2, which is interchangeable. The homologous protein CooC3 does not allow Ni insertion in either CooS. The two CODHs from Tc have similar properties: they can both oxidize and produce CO. The Michaelis constants (Km) are in the microM range for CO and in the mM range (CODH 1) or above (CODH 2) for CO2. Product inhibition is observed only for CO2 reduction, consistent with CO2 binding being much weaker than CO binding. The two enzymes are rather O2 sensitive (similarly to CODH II from Carboxydothermus hydrogenoformans), and react more slowly with O2 than any other CODH for which these data are available.

Legend

Protein

Chemical

Disease

Primary Citation of related structures