ISDA: 6T5T

Deposition Date 2019-10-17

Release Date 2020-11-18

Last Version Date 2024-01-24

Entry Detail

PDB ID:

6T5T

Keywords:

DNA BINDING PROTEIN

Title:

Crystal structure of Archaeoglobus fulgidus Argonaute protein with cognate DNA oligoduplex 5'-pATTGTGGCCACAAT

Biological Source:

Source Organism:

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (Taxon ID: 224325)
Escherichia coli (Taxon ID: 562)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.21

R-Value Work:

0.18

Space Group:

P 2 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Piwi protein AF_1318
Gene (Uniprot):AF_1318
Chain IDs:A
Chain Length:441
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)

UniProt ID:O28951 Pfam ID:PF02171

Polymer Type:polydeoxyribonucleotide
Molecule:5'-D(*AP*TP*TP*GP*TP*GP*GP*CP*CP*AP*CP*AP*AP*TP)-3'
Chain IDs:B (auth: R), C (auth: S)
Chain Length:14
Number of Molecules:2
Biological Source:Escherichia coli

Ligand Molecules