6T48 image
Deposition Date 2019-10-12
Release Date 2020-01-15
Last Version Date 2024-02-07
Entry Detail
PDB ID:
6T48
Keywords:
Title:
Bovine enterovirus F3 in complex with glutathione and a Cysteinylglycine dipeptide
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.17 Å
R-Value Free:
0.20
R-Value Work:
0.20
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VP1
Chain IDs:A
Chain Length:275
Number of Molecules:1
Biological Source:Enterovirus F
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VP2
Chain IDs:B
Chain Length:244
Number of Molecules:1
Biological Source:Enterovirus F
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VP3
Chain IDs:C
Chain Length:243
Number of Molecules:1
Biological Source:Enterovirus F
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VP4
Chain IDs:D
Chain Length:71
Number of Molecules:1
Biological Source:Enterovirus F
Primary Citation
Glutathione facilitates enterovirus assembly by binding at a druggable pocket.
Commun Biol 3 9 9 (2020)
PMID: 31909201 DOI: 10.1038/s42003-019-0722-x

Abstact

Enteroviruses cause a range of human and animal diseases, some life-threatening, but there remain no licenced anti-enterovirus drugs. However, a benzene-sulfonamide derivative and related compounds have been shown recently to block infection of a range of enteroviruses by binding the capsid at a positively-charged surface depression conserved across many enteroviruses. It has also been established that glutathione is essential for the assembly of many enteroviruses, interacting with the capsid proteins to facilitate the formation of the pentameric assembly intermediate, although the mechanism is unknown. Here we show, by high resolution structure analyses of enterovirus F3, that reduced glutathione binds to the same interprotomer pocket as the benzene-sulfonamide derivative. Bound glutathione makes strong interactions with adjacent protomers, thereby explaining the underlying biological role of this druggable binding pocket and delineating the pharmacophore for potential antivirals.

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Chemical

Disease

Primary Citation of related structures
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