6ST9 image
Entry Detail
PDB ID:
6ST9
Keywords:
Title:
Crystal structure of the strawberry pathogenesis-related 10 (PR-10) Fra a 1.02 protein, D48R mutant
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2019-09-10
Release Date:
2019-12-18
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Major strawberry allergen Fra a 1-2
Mutations:D48R
Chain IDs:A, B
Chain Length:163
Number of Molecules:2
Biological Source:Fragaria ananassa
Ligand Molecules
Primary Citation
Structural Bases for the Allergenicity of Fra a 1.02 in Strawberry Fruits.
J.Agric.Food Chem. 68 10951 10961 (2020)
PMID: 31774998 DOI: 10.1021/acs.jafc.9b05714

Abstact

Although strawberries are highly appreciated fruits, their intake can induce allergic reactions in atopic patients. These reactions can be due to the patient's previous sensitization to the major birch pollen allergen Bet v 1, by which IgE generated in response to Bet v 1 cross-reacts with the structurally related strawberry Fra a 1 protein family. Fra a 1.02 is the most expressed paralog in ripe strawberries and is highly allergenic. To better understand the molecular mechanisms regulating this allergic response, we have determined the three-dimensional structure of Fra a 1.02 and four site-directed mutants that were designed based on their positions in potential epitopes. Fra a 1.02 and mutants conform to the START fold. We show that the cross-reactivity of all the mutant variants to IgE from patients allergic to Bet v 1 was significantly reduced without altering the conserved structural fold, so that they could potentially be used as hypoallergenic Fra a 1 variants for the generation of vaccines against strawberry allergy in atopic patients.

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Primary Citation of related structures