6SNL image
Deposition Date 2019-08-26
Release Date 2020-12-09
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6SNL
Keywords:
Title:
(R)-selective amine transaminase from Exophiala sideris
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.13 Å
R-Value Free:
0.28
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:amine transaminase
Gene (Uniprot):PV11_02554
Chain IDs:A, B, C, D, E, F
Chain Length:347
Number of Molecules:6
Biological Source:Exophiala sideris
Primary Citation
Expanding the Toolbox of R-Selective Amine Transaminases by Identification and Characterization of New Members.
Chembiochem 22 1232 1242 (2021)
PMID: 33242357 DOI: 10.1002/cbic.202000692

Abstact

Amine transaminases (ATAs) are used to synthesize enantiomerically pure amines, which are building blocks for pharmaceuticals and agrochemicals. R-selective ATAs belong to the fold type IV PLP-dependent enzymes, and different sequence-, structure- and substrate scope-based features have been identified in the past decade. However, our knowledge is still restricted due to the limited number of characterized (R)-ATAs, with additional bias towards fungal origin. We aimed to expand the toolbox of (R)-ATAs and contribute to the understanding of this enzyme subfamily. We identified and characterized four new (R)-ATAs. The ATA from Exophiala sideris contains a motif characteristic for d-ATAs, which was previously believed to be a disqualifying factor for (R)-ATA activity. The crystal structure of the ATA from Shinella is the first from a Gram-negative bacterium. The ATAs from Pseudonocardia acaciae and Tetrasphaera japonica are the first characterized (R)-ATAs with a shortened/missing N-terminal helix. The active-site charges vary significantly between the new and known ATAs, correlating with their diverging substrate scope.

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