6SKU image
Deposition Date 2019-08-16
Release Date 2020-06-10
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6SKU
Title:
Legionella effector AnkX in complex with human Rab1b
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phosphocholine transferase AnkX
Gene (Uniprot):ankX
Mutations:C48S, C84S, G108C, C172S
Chain IDs:A
Chain Length:803
Number of Molecules:1
Biological Source:Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Polymer Type:polypeptide(L)
Molecule:Ras-related protein Rab-1B
Gene (Uniprot):RAB1B
Chain IDs:B
Chain Length:175
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Legionellaeffector AnkX displaces the switch II region for Rab1b phosphocholination.
Sci Adv 6 eaaz8041 eaaz8041 (2020)
PMID: 32440549 DOI: 10.1126/sciadv.aaz8041

Abstact

The causative agent of Legionnaires disease, Legionella pneumophila, translocates the phosphocholine transferase AnkX during infection and thereby posttranslationally modifies the small guanosine triphosphatase (GTPase) Rab1 with a phosphocholine moiety at S76 using cytidine diphosphate (CDP)-choline as a cosubstrate. The molecular basis for Rab1 binding and enzymatic modification have remained elusive because of lack of structural information of the low-affinity complex with AnkX. We combined thiol-reactive CDP-choline derivatives with recombinantly introduced cysteines in the AnkX active site to covalently capture the heterocomplex. The resulting crystal structure revealed that AnkX induces displacement of important regulatory elements of Rab1 by placing a β sheet into a conserved hydrophobic pocket, thereby permitting phosphocholine transfer to the active and inactive states of the GTPase. Together, the combination of chemical biology and structural analysis reveals the enzymatic mechanism of AnkX and the family of filamentation induced by cyclic adenosine monophosphate (FIC) proteins.

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Primary Citation of related structures